ECOD: domain e2okxA5

Domain ID e2okxA5

A: alpha superhelices
X: Repetitive alpha hairpins
H: alpha/alpha toroid
T: alpha/alpha toroid
F: Bac_rhamnosid6H

UID:	001499444
Type:	Automatic domain
Parent:	e2okxB4
Range:	A:532-877
Ligands:	GOL
PDB:	2okx
PDB Description:	Rhamnosidase B
UniProt:	Q93RE7
Species:	Bacillus sp. GL1

Domain
In chain context
In PDB context

Structure of domain e2okxA5

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e2okxA4	A:3-196	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e2okxA1	A:197-214,A:403-531	jelly-roll	Concanavalin A-like	Galactose-binding domain-like
e2okxA6	A:218-395	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2okxA5	A:532-877	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e2okxA3	A:878-956	Glycosyl hydrolase domain-like	Glycoside hydrolase family 127 middle domain-related	Glycoside hydrolase family 127 middle domain-related
e2okxB1	B:1-196	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2okxB2	B:197-217,B:396-531	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2okxB3	B:218-395	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2okxB4	B:532-877	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e2okxB5	B:878-956	Glycosyl hydrolase domain-like	Glycoside hydrolase family 127 middle domain-related	Glycoside hydrolase family 127 middle domain-related

Structural contacts of domain e2okxA5 of H-group "alpha/alpha toroid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2okxB4	A:X,Y,Z->B:x,y,z	alpha/alpha toroid	Interaction Interface Pymol
e2okxB2	A:X,Y,Z->B:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol
e2okxB5	A:X,Y,Z->B:x,y,z	Glycoside hydrolase family 127 middle domain-related	Interaction Interface Pymol