| UID: | 000005357 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:188-262,A:424-575 |
| Ligands: | EDO |
| PDB: | 2py5 |
| PDB Description: | DNA polymerase |
| UniProt: | P03680 |
| Species: | Bacillus phage phi29 |
Structure of domain e2py5A2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e2py5A2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2py5B4 | A:x,y,z->B:-X+1,Y-1/2,-Z+1 | Ribonuclease H-like | Interaction Interface Pymol |
| e2py5B2 | A:x,y,z->B:-X+1,Y-1/2,-Z+1 | Adenylyl and guanylyl cyclase catalytic domain-like | Interaction Interface Pymol |
| e2py5B1 | A:X,Y,Z->B:x,y,z | "fingers" domain in bacteriophage RB69-like DNA polymerase I | Interaction Interface Pymol |
| e2py5B3 | A:x,y,z->B:X-1,Y,Z | insertion domain in bacteriophage phi29 DNA polymerase | Interaction Interface Pymol |
| e2py5A3 | A:x,y,z->A:X-1,Y,Z | insertion domain in bacteriophage phi29 DNA polymerase | Interaction Interface Pymol |
| e2py5A4 | A:X-1,Y,Z->A:x,y,z | Ribonuclease H-like | Interaction Interface Pymol |
| e2py5A4 | A:X-1,Y,Z-1->A:x,y,z | Ribonuclease H-like | Interaction Interface Pymol |
