Domain ID e2pylA4

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: DNA_pol_B_2
UID: 000115172
Type: Automatic domain
Parent: e2py5A4
Range: A:5-187
Ligands: EDO
PDB: 2pyl
PDB Description: DNA polymerase
UniProt: P03680
Species: Bacillus phage phi29

Structure of domain e2pylA4

Structural contacts of domain e2pylA4 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2pylA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e2pylA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2pylA2 A:X-1/2,-Y+1/2,-Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2pylA3 A:-X-1,Y-1/2,-Z-1/2->A:x,y,z insertion domain in bacteriophage phi29 DNA polymerase Interaction Interface Pymol
e2pylA2 A:-X-1,Y-1/2,-Z-1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2pylA3 A:X,Y-1,Z->A:x,y,z insertion domain in bacteriophage phi29 DNA polymerase Interaction Interface Pymol