Domain ID e2qa4E1

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  • A: a+b two layers
  • X: Ribosomal protein L6
  • H: Ribosomal protein L6
  • T: Ribosomal protein L6
  • F: Ribosomal_L6
UID: 000339050
Type: Automatic domain
Parent: e1rl6A1
Range: E:1-79
Ligands: CL
PDB: 2qa4
PDB Description: 50S RIBOSOMAL PROTEIN L6P
UniProt: P14135
Species: Haloarcula marismortui

Structure of domain e2qa4E1

Domains in the same chain:

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e2qa4E1 E:1-79 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qa4E2 E:80-172 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6

Domains in the same PDB:

e2qa411 1:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2qa421 2:1-49 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e2qa431 3:1-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2qa4A1 A:1-90 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2qa4A2 A:91-237 SH3 SH3 SH3
e2qa4B1 B:1-337 cradle loop barrel RIFT-related Alanine racemase-C
e2qa4C1 C:1-246 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2qa4D1 D:10-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2qa4E1 E:1-79 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qa4E2 E:80-172 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qa4F1 F:1-119 Bacillus chorismate mutase-like L30e-like L30e-like
e2qa4H1 H:1-163 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e2qa4I2 I:5-69 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e2qa4I1 I:67-130 HTH HTH Ribosomal protein L11, C-terminal domain
e2qa4J1 J:4-145 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2qa4K1 K:1-132 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2qa4L1 L:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e2qa4M1 M:1-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2qa4N1 N:1-186 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2qa4O1 O:1-115 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e2qa4P1 P:1-54 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e2qa4P2 P:55-142 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e2qa4Q1 Q:1-95 SH3 SH3 SH3
e2qa4R1 R:1-150 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2qa4S1 S:1-81 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2qa4T1 T:1-119 SH3 SH3 SH3
e2qa4U1 U:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2qa4V1 V:1-65 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2qa4W1 W:1-154 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2qa4X1 X:7-88 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e2qa4Y1 Y:95-236 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e2qa4Z1 Z:10-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e2qa4E1 of H-group "Ribosomal protein L6":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qa4J1 E:X,Y,Z->J:x,y,z Ribosomal protein L13 and L16-A Interaction Interface Pymol