Domain ID e2qbkN1

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  • A: a+b two layers
  • X: Enolase-N/ribosomal protein
  • H: Prokaryotic ribosomal protein L17
  • T: Prokaryotic ribosomal protein L17
  • F: Ribosomal_L17
UID: 000070434
Type: Automatic domain
Parent: e1gd8A1
Range: N:14-117
PDB: 2qbk
PDB Description:
Hsap BLAST neighbor: Q9NRX2
Species:

Structure of domain e2qbkN1

Domains in the same chain:

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e2qbkN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17

Domains in the same PDB:

e2qbk01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2qbk21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e2qbk31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e2qbk41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e2qbk61 6:3-185 RRF/tRNA synthetase additional domain-like Ribosome recycling factor, RRF Ribosome recycling factor, RRF
e2qbkC3 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2qbkC4 C:125-271 SH3 SH3 SH3
e2qbkE1 E:1-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2qbkF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2qbkG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qbkG1 G:82-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qbkH2 H:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e2qbkI3 I:1-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e2qbkI4 I:74-141 HTH HTH Ribosomal protein L11, C-terminal domain
e2qbkJ1 J:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2qbkK1 K:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2qbkN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2qbkR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e2qbkS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2qbkT1 T:6-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2qbkU2 U:1-102 SH3 SH3 SH3
e2qbkV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2qbkW1 W:19-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2qbkX1 X:1-60 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2qbkY1 Y:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2qbkZ1 Z:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Structural contacts of domain e2qbkN1 of H-group "Prokaryotic ribosomal protein L17":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qbk01 N:x,y,z->0:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e2qbkS1 N:X,Y,Z->S:x,y,z Ribosomal protein L22 Interaction Interface Pymol