Domain ID e2qexN1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_L5e
UID: 000349247
Type: Automatic domain
Parent: e1vqoN1
Range: N:1-186
Ligands: CL
PDB: 2qex
PDB Description: 50S ribosomal protein L18P
UniProt: P14123
Hsap BLAST neighbor: P46777
Species: Haloarcula marismortui

Structure of domain e2qexN1

Domains in the same chain:

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e2qexN1 N:1-186 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e2qex11 1:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2qex21 2:1-49 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e2qex31 3:1-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2qexA1 A:1-90 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2qexA2 A:91-237 SH3 SH3 SH3
e2qexB1 B:1-337 cradle loop barrel RIFT-related Alanine racemase-C
e2qexC1 C:1-246 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2qexD1 D:10-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2qexE1 E:1-79 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qexE2 E:80-172 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2qexF1 F:1-119 Bacillus chorismate mutase-like L30e-like L30e-like
e2qexG1 G:12-29,G:63-73 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e2qexH1 H:1-163 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e2qexI1 I:71-134 HTH HTH Ribosomal protein L11, C-terminal domain
e2qexJ1 J:4-145 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2qexK1 K:1-132 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2qexL1 L:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e2qexM1 M:1-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2qexN1 N:1-186 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2qexO1 O:1-115 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e2qexP1 P:1-54 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e2qexP2 P:55-142 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e2qexQ1 Q:1-95 SH3 SH3 SH3
e2qexR1 R:1-150 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2qexS1 S:1-81 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2qexT1 T:1-119 SH3 SH3 SH3
e2qexU1 U:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2qexV1 V:1-65 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2qexW1 W:1-154 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2qexX1 X:7-88 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e2qexY1 Y:95-236 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e2qexZ1 Z:10-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e2qexN1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qexQ1 N:X,Y,Z->Q:x,y,z SH3 Interaction Interface Pymol
e2qexD1 N:x,y,z->D:X,Y,Z Ribosomal protein L5 Interaction Interface Pymol