Domain ID e2qj1A3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: 'palm' domain in birnaviruse RNA-dependent RNA polymerase
  • F: Birna_RdRp_palm
UID: 000332069
Type: Automatic domain
Parent: e2pggA3
Range: A:27-535
PDB: 2qj1
PDB Description: Infectious bursal disease virus VP1 polymerase
UniProt: Q9Q6Q5
Species: Infectious bursal disease virus

Structure of domain e2qj1A3

Structural contacts of domain e2qj1A3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qj1A3 A:x,y,z->A:-Y-1,-X-1,-Z+5/6 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2qj1A1 A:x,y,z->A:-Y-1,-X-1,-Z+5/6 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2qj1A3 A:-Y-1,-X-1,-Z+5/6->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2qj1A1 A:-Y-1,-X-1,-Z+5/6->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2qj1A1 A:x,y,z->A:-X-1,-X+Y-1,-Z+2/3 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2qj1A3 A:x,y,z->A:-X-1,-X+Y-1,-Z+2/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2qj1A3 A:-X-1,-X+Y-1,-Z+2/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2qj1A2 A:x,y,z->A:-X+Y,Y,-Z+1/2 C-terminal bundle domain in birnaviruse RNA-dependent RNA polymerase Interaction Interface Pymol
e2qj1A3 A:x,y,z->A:-X+Y,Y,-Z+1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2qj1A3 A:-X+Y,Y,-Z+1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2qj1A2 A:-X+Y,Y,-Z+1/2->A:x,y,z C-terminal bundle domain in birnaviruse RNA-dependent RNA polymerase Interaction Interface Pymol