ECOD: domain e2qqkH1

Domain ID e2qqkH1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: V-set

UID:	000331679
Type:	Automatic domain
Parent:	e1mjuH1
Range:	H:1-113
PDB:	2qqk
PDB Description:	Antibody Heavy Chain
Hsap BLAST neighbor:	A0A0B4J1X5
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2qqkH1

Domains in the same chain:

Download Pymol

e2qqkH1	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qqkH2	H:114-220	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2qqkA4	A:27-144	jelly-roll	Spermadhesin, CUB domain	Spermadhesin, CUB domain
e2qqkA3	A:145-270	jelly-roll	Spermadhesin, CUB domain	Spermadhesin, CUB domain
e2qqkA2	A:271-432	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2qqkA1	A:433-594	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2qqkH1	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qqkH2	H:114-220	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qqkL1	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qqkL2	L:108-211	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2qqkH1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2qqkL1	H:X,Y,Z->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2qqkA2	H:-X-1/2,Y-1/2,-Z-1->A:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol
e2qqkA1	H:-X-1/2,Y-1/2,-Z-1->A:x,y,z	Galactose-binding domain-like	Interaction Interface Pymol
e2qqkA4	H:x,y,z->A:-X,Y,-Z-1	Spermadhesin, CUB domain	Interaction Interface Pymol
e2qqkA3	H:x,y,z->A:-X,Y,-Z-1	Spermadhesin, CUB domain	Interaction Interface Pymol
e2qqkA4	H:x,y,z->A:X,Y,Z	Spermadhesin, CUB domain	Interaction Interface Pymol