Domain ID e2rdoD1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 002044184
Type: Automatic domain
Parent: e3j9zLX1
Range: D:1-209
PDB: 2rdo
PDB Description: 50S ribosomal protein L3
UniProt: P60438
Hsap BLAST neighbor: P09001
Species: Escherichia coli

Structure of domain e2rdoD1

Domains in the same chain:

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e2rdoD1 D:1-209 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e2rdo01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2rdo11 1:1-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2rdo21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e2rdo31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e2rdo41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e2rdo72 7:2-35,7:64-290 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2rdo74 7:291-408 cradle loop barrel RIFT-related Alanine racemase-C
e2rdo73 7:412-489 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2rdo71 7:490-610 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2rdo75 7:611-700 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2rdo81 8:1-185 RRF/tRNA synthetase additional domain-like Ribosome recycling factor, RRF Ribosome recycling factor, RRF
e2rdo91 9:5-59,9:151-227 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e2rdo92 9:60-150 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e2rdoC3 C:3-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2rdoC4 C:125-269 SH3 SH3 SH3
e2rdoD1 D:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e2rdoE1 E:1-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2rdoF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2rdoG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2rdoG1 G:82-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2rdoH1 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e2rdoH2 H:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e2rdoI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e2rdoI1 I:73-138 HTH HTH Ribosomal protein L11, C-terminal domain
e2rdoJ1 J:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2rdoK1 K:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2rdoL1 L:1-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e2rdoM1 M:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e2rdoN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2rdoO1 O:1-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2rdoP1 P:1-114 SH3 SH3 SH3
e2rdoQ1 Q:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e2rdoR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e2rdoS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2rdoT1 T:6-99 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2rdoU1 U:3-101 SH3 SH3 SH3
e2rdoV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2rdoW1 W:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2rdoX1 X:1-60 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2rdoY1 Y:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2rdoZ1 Z:1-70 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p