ECOD: domain e2rgnB1

Domain ID e2rgnB1

A: alpha bundles
X: DH domain-like
H: DBL homology domain (DH-domain)
T: DBL homology domain (DH-domain)
F: RhoGEF

UID:	000197607
Type:	Automatic domain
Parent:	e1dbhA2
Range:	B:149-342
PDB:	2rgn
PDB Description:	Rho guanine nucleotide exchange factor 25
UniProt:	Q86VW2
Hsap BLAST neighbor:	Q86VW2
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e2rgnB1	B:149-342	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e2rgnB2	B:343-490	PH domain-like	PH domain-like	PH domain-like

Domains in the same PDB:

e2rgnA2	A:38-66,A:184-353	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rgnA1	A:67-183	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain
e2rgnB1	B:149-342	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e2rgnB2	B:343-490	PH domain-like	PH domain-like	PH domain-like
e2rgnC1	C:4-180	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rgnD2	D:38-66,D:184-353	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rgnD1	D:67-183	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain
e2rgnE3	E:150-343	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e2rgnE4	E:344-466	PH domain-like	PH domain-like	PH domain-like
e2rgnF1	F:5-180	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2rgnB1 of H-group "DBL homology domain (DH-domain)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2rgnA2	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2rgnC1	B:X,Y,Z->C:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2rgnF1	B:X,Y-1,Z+1->F:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2rgnA2	B:x,y,z->A:X,Y-1,Z	P-loop domains-related	Interaction Interface Pymol
e2rgnF1	B:X-1,Y-1,Z+1->F:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2rgnE3	B:X-1,Y-1,Z+1->E:x,y,z	DBL homology domain (DH-domain)	Interaction Interface Pymol