ECOD: domain e2rgnE3

Domain ID e2rgnE3

A: alpha bundles
X: DH domain-like
H: DBL homology domain (DH-domain)
T: DBL homology domain (DH-domain)
F: RhoGEF

UID:	001177203
Type:	Automatic domain
Parent:	e1dbhA2
Range:	E:150-343
PDB:	2rgn
PDB Description:	Rho guanine nucleotide exchange factor 25
UniProt:	Q86VW2
Hsap BLAST neighbor:	Q86VW2
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2rgnE3

Domains in the same chain:

Download Pymol

e2rgnE3	E:150-343	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e2rgnE4	E:344-466	PH domain-like	PH domain-like	PH domain-like

Domains in the same PDB:

e2rgnA2	A:38-66,A:184-353	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rgnA1	A:67-183	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain
e2rgnB1	B:149-342	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e2rgnB2	B:343-490	PH domain-like	PH domain-like	PH domain-like
e2rgnC1	C:4-180	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rgnD2	D:38-66,D:184-353	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2rgnD1	D:67-183	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain	Transducin (alpha subunit), insertion domain
e2rgnE3	E:150-343	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e2rgnE4	E:344-466	PH domain-like	PH domain-like	PH domain-like
e2rgnF1	F:5-180	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2rgnE3 of H-group "DBL homology domain (DH-domain)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2rgnD2	E:x,y,z->D:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2rgnF1	E:X,Y,Z->F:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2rgnD2	E:X-1,Y,Z->D:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2rgnC1	E:x,y,z->C:X-1,Y-1,Z+1	P-loop domains-related	Interaction Interface Pymol
e2rgnB1	E:x,y,z->B:X-1,Y-1,Z+1	DBL homology domain (DH-domain)	Interaction Interface Pymol