Domain ID e2uu9L1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 000023938
Type: Automatic domain
Parent: e2uubL1
Range: L:5-122
Ligands: MG
PDB: 2uu9
PDB Description: 30S RIBOSOMAL PROTEIN S12
UniProt: Q5SHN3
Hsap BLAST neighbor: O15235
Species:

Structure of domain e2uu9L1

Domains in the same chain:

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e2uu9L1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e2uu9B1 B:7-127,B:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e2uu9C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2uu9C1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2uu9D1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e2uu9E1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2uu9E2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2uu9F1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2uu9G1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2uu9H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2uu9H2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2uu9I1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2uu9J1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2uu9K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2uu9L1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2uu9M1 M:2-126 HhH/H2TH H2TH H2TH
e2uu9N1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2uu9O1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2uu9P1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2uu9Q1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2uu9R1 R:19-88 HTH HTH tri-helical
e2uu9S1 S:2-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e2uu9T1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2uu9L1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2uu9Q1 L:X,Y,Z->Q:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e2uu9H2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol