Domain ID e2uxcR1

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Ribosomal_S18
UID: 000045083
Type: Automatic domain
Parent: e2uubR1
Range: R:19-88
PDB: 2uxc
PDB Description: RIBOSOMAL PROTEIN S18
UniProt: Q5SLQ0
Hsap BLAST neighbor: Q9Y3D5
Species:

Structure of domain e2uxcR1

Domains in the same chain:

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e2uxcR1 R:19-88 HTH HTH tri-helical

Domains in the same PDB:

e2uxcB1 B:7-127,B:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e2uxcC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2uxcC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2uxcD1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e2uxcE1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2uxcE2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2uxcF1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2uxcG1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2uxcH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2uxcH2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2uxcI1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2uxcJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2uxcK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2uxcL1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2uxcM1 M:2-126 HhH/H2TH H2TH H2TH
e2uxcN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2uxcO1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2uxcP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2uxcQ1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2uxcR1 R:19-88 HTH HTH tri-helical
e2uxcS1 S:2-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e2uxcT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2uxcR1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2uxcF1 R:x,y,z->F:X,Y,Z Ribosomal protein S6 Interaction Interface Pymol
e2uxcK1 R:x,y,z->K:X,Y,Z Ribonuclease H-like Interaction Interface Pymol