ECOD: domain e2v3cB1

Domain ID e2v3cB1

A: alpha arrays
X: HTH
H: HTH
T: Putative DNA-binding domain
F: SRP19

UID:	000046637
Type:	Automatic domain
Parent:	e1jidA1
Range:	B:1-87
PDB:	2v3c
PDB Description:	SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN
UniProt:	Q58440
Species:	Methanocaldococcus jannaschii

Domain
In chain context
In PDB context

Structure of domain e2v3cB1

Domains in the same chain:

Download Pymol

e2v3cB1	B:1-87	HTH	HTH	Putative DNA-binding domain

Domains in the same PDB:

e2v3cA1	A:1-87	HTH	HTH	Putative DNA-binding domain
e2v3cB1	B:1-87	HTH	HTH	Putative DNA-binding domain
e2v3cC5	C:2-88	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e2v3cC4	C:89-301	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2v3cC6	C:302-341,C:365-428	HTH	HTH	tri-helical
e2v3cD2	D:2-89	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e2v3cD3	D:90-299	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2v3cD1	D:300-339,D:365-428	HTH	HTH	tri-helical

Structural contacts of domain e2v3cB1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2v3cC6	B:X-1,Y-1,Z->C:x,y,z	HTH	Interaction Interface Pymol
e2v3cA1	B:X-1,Y-1,Z->A:x,y,z	HTH	Interaction Interface Pymol
e2v3cD3	B:x,y,z->D:X-1/2,-Y+1/2,-Z+3	P-loop domains-related	Interaction Interface Pymol
e2v3cD1	B:X,Y,Z->D:x,y,z	HTH	Interaction Interface Pymol
e2v3cA1	B:X,Y-1,Z->A:x,y,z	HTH	Interaction Interface Pymol