ECOD: domain e2vgbB3

Domain ID e2vgbB3

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: PK beta-barrel domain-like
F: PK

UID:	001516324
Type:	Automatic domain
Parent:	e2g50A1
Range:	B:160-261
DrugDomain:	DB02726
PDB:	2vgb
PDB Description:	PYRUVATE KINASE ISOZYMES R/L
UniProt:	P30613
Hsap BLAST neighbor:	P30613
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2vgbB3

Domains in the same chain:

Download Pymol

e2vgbB2	B:57-159,B:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgbB3	B:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgbB1	B:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Domains in the same PDB:

e2vgbA1	A:57-159,A:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgbA3	A:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgbA4	A:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vgbB2	B:57-159,B:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgbB3	B:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgbB1	B:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vgbC2	C:57-159,C:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgbC1	C:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgbC3	C:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vgbD3	D:57-159,D:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgbD4	D:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgbD1	D:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Structural contacts of domain e2vgbB3 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vgbD3	B:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol
e2vgbA4	B:x,y,z->A:X-1,Y,Z	PK C-terminal domain-like	Interaction Interface Pymol