ECOD: domain e2vgfB1

Domain ID e2vgfB1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: PK beta-barrel domain-like
F: PK

UID:	001516542
Type:	Automatic domain
Parent:	e2g50A1
Range:	B:160-261
Ligands:	K PGA
DrugDomain:	DB02726
PDB:	2vgf
PDB Description:	PYRUVATE KINASE ISOZYMES R/L
UniProt:	P30613
Hsap BLAST neighbor:	P30613
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2vgfB1

Domains in the same chain:

Download Pymol

e2vgfB3	B:57-159,B:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgfB1	B:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgfB2	B:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Domains in the same PDB:

e2vgfA2	A:57-159,A:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgfA1	A:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgfA3	A:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vgfB3	B:57-159,B:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgfB1	B:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgfB2	B:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vgfC3	C:57-159,C:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgfC1	C:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgfC2	C:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vgfD2	D:57-159,D:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vgfD4	D:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vgfD1	D:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Structural contacts of domain e2vgfB1 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vgfD2	B:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol