ECOD: domain e2vggB2

Domain ID e2vggB2

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: PK beta-barrel domain-like
F: PK

UID:	001516982
Type:	Automatic domain
Parent:	e2g50A1
Range:	B:160-261
PDB:	2vgg
PDB Description:	PYRUVATE KINASE ISOZYMES R/L
UniProt:	P30613
Hsap BLAST neighbor:	P30613
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2vggB2

Domains in the same chain:

Download Pymol

e2vggB3	B:57-159,B:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vggB2	B:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vggB1	B:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Domains in the same PDB:

e2vggA2	A:64-159,A:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vggA4	A:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vggA1	A:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vggB3	B:57-159,B:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vggB2	B:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vggB1	B:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vggC3	C:58-159,C:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vggC2	C:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vggC1	C:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e2vggD3	D:62-159,D:262-439	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vggD1	D:160-261	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e2vggD2	D:440-573	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Structural contacts of domain e2vggB2 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vggD3	B:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol
e2vggA1	B:x,y,z->A:X-1,Y,Z	PK C-terminal domain-like	Interaction Interface Pymol