Domain ID e2vhmN1

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  • A: a+b two layers
  • X: Enolase-N/ribosomal protein
  • H: Prokaryotic ribosomal protein L17
  • T: Prokaryotic ribosomal protein L17
  • F: Ribosomal_L17
UID: 000070420
Type: Automatic domain
Parent: e1gd8A1
Range: N:14-117
PDB: 2vhm
PDB Description:
Hsap BLAST neighbor: Q9NRX2
Species:

Structure of domain e2vhmN1

Domains in the same chain:

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e2vhmN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17

Domains in the same PDB:

e2vhm01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2vhm21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e2vhm31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e2vhm41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e2vhmC3 C:3-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2vhmC4 C:125-270 SH3 SH3 SH3
e2vhmE2 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2vhmF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2vhmG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2vhmG1 G:82-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2vhmH2 H:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e2vhmI3 I:1-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e2vhmI4 I:74-141 HTH HTH Ribosomal protein L11, C-terminal domain
e2vhmJ1 J:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2vhmK1 K:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2vhmN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2vhmR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e2vhmS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2vhmT1 T:6-99 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2vhmU2 U:1-103 SH3 SH3 SH3
e2vhmV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2vhmW1 W:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2vhmX2 X:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2vhmY1 Y:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2vhmZ1 Z:1-70 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p

Structural contacts of domain e2vhmN1 of H-group "Prokaryotic ribosomal protein L17":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vhm01 N:x,y,z->0:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e2vhmS1 N:X,Y,Z->S:x,y,z Ribosomal protein L22 Interaction Interface Pymol