Domain ID e2vhpL1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 000023942
Type: Automatic domain
Parent: e2uubL1
Range: L:1-118
PDB: 2vhp
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e2vhpL1

Domains in the same chain:

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e2vhpL1 L:1-118 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e2vhpC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2vhpC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2vhpE1 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2vhpE2 E:78-147 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2vhpF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2vhpG1 G:11-146 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2vhpH1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2vhpH2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2vhpJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2vhpK1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2vhpL1 L:1-118 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2vhpN1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2vhpO1 O:2-86 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2vhpP1 P:1-78 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2vhpR2 R:19-74 HTH HTH tri-helical
e2vhpT1 T:4-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2vhpL1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vhpH2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol