Domain ID e2vk1C2

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_N
UID: 000356830
Type: Automatic domain
Parent: e1pvdA2
Range: C:2-180
Ligands: PYR TPP
PDB: 2vk1
PDB Description: PYRUVATE DECARBOXYLASE ISOZYME 1
UniProt: P06169
Species: Saccharomyces cerevisiae

Structure of domain e2vk1C2

Domains in the same chain:

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e2vk1C2 C:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1C1 C:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk1C3 C:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2vk1A2 A:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1A1 A:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk1A3 A:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1B2 B:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1B1 B:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk1B3 B:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1C2 C:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1C1 C:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk1C3 C:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1D2 D:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk1D1 D:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk1D3 D:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2vk1C2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vk1D2 C:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vk1D3 C:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vk1D1 C:X,Y,Z->D:x,y,z Rossmann-related Interaction Interface Pymol