ECOD: domain e2vpdC1

Domain ID e2vpdC1

A: few secondary structure elements
X: RING/U-box-like
H: RING/U-box-like
T: FYVE/PHD zinc finger
F: PHD

UID:	000343835
Type:	Automatic domain
Parent:	e3kv4A1
Range:	C:332-397
Ligands:	ZN
PDB:	2vpd
PDB Description:	PYGOPUS HOMOLOG 1
UniProt:	Q9Y3Y4
Hsap BLAST neighbor:	Q9Y3Y4
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2vpdC1

Domains in the same chain:

Download Pymol

e2vpdC1	C:332-397	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger

Domains in the same PDB:

e2vpdA1	A:340-398	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e2vpdC1	C:332-397	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger

Structural contacts of domain e2vpdC1 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vpdA1	C:x,y,z->A:X,Y,Z	RING/U-box-like	Interaction Interface Pymol
e2vpdA1	C:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z	RING/U-box-like	Interaction Interface Pymol