Domain ID e3kv4A1

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  • A: few secondary structure elements
  • X: RING/U-box-like
  • H: RING/U-box-like
  • T: FYVE/PHD zinc finger
  • F: PHD
UID: 000137506
Type: Manual and representative domain
Range: A:3-64
Ligands: EDO ZN
PDB: 3kv4
PDB Description: PHD FINGER PROTEIN 8
UniProt: Q9UPP1
Hsap BLAST neighbor: Q9UPP1
Species: Homo sapiens

Structure of domain e3kv4A1

Structural contacts of domain e3kv4A1 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kv4A3 A:x,y,z->A:X-1/2,-Y-1/2,-Z+1/4 C-terminal helical domain in Jumonji domain-containing histone demethylases Interaction Interface Pymol
e3kv4A2 A:x,y,z->A:-Y-1/2,X+1/2,Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e3kv4A2 A:x,y,z->A:Y-1,X,-Z Double-stranded beta-helix Interaction Interface Pymol