Domain ID e2vzsA5

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Unmapped domains
UID: 000008859
Type: Manual and representative domain
Range: A:336-674
Ligands: CD GCS GOL
PDB: 2vzs
PDB Description: EXO-BETA-D-GLUCOSAMINIDASE
UniProt: Q56F26
Species: Amycolatopsis orientalis

Structure of domain e2vzsA5

Domains in the same chain:

Download Pymol

e2vzsA1 A:42-225 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vzsA2 A:226-335 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsA5 A:336-674 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vzsA4 A:675-777 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsA3 A:778-899 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2vzsA1 A:42-225 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vzsA2 A:226-335 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsA5 A:336-674 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vzsA4 A:675-777 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsA3 A:778-899 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB1 B:42-225 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vzsB2 B:226-335 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB5 B:336-674 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vzsB4 B:675-777 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB3 B:778-899 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vzsA5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vzsB3 A:X-1,Y,Z+1->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2vzsA2 A:-X+1,Y-1/2,-Z+2->A:x,y,z Immunoglobulin-related Interaction Interface Pymol