Domain ID e2vzsB1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Galactose-binding domain-like
  • T: Galactose-binding domain-like
  • F: Glyco_hydro_2_N2
UID: 000030557
Type: Automatic domain
Parent: e2je8A1
Range: B:42-225
Ligands: CD GCS
PDB: 2vzs
PDB Description: EXO-BETA-D-GLUCOSAMINIDASE
UniProt: Q56F26
Species: Amycolatopsis orientalis

Structure of domain e2vzsB1

Domains in the same chain:

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e2vzsB1 B:42-225 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vzsB2 B:226-335 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB5 B:336-674 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vzsB4 B:675-777 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB3 B:778-899 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2vzsA1 A:42-225 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vzsA2 A:226-335 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsA5 A:336-674 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vzsA4 A:675-777 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsA3 A:778-899 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB1 B:42-225 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vzsB2 B:226-335 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB5 B:336-674 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vzsB4 B:675-777 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vzsB3 B:778-899 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vzsB1 of H-group "Galactose-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vzsA2 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2vzsA3 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol