ECOD: domain e2w55G4

Domain ID e2w55G4

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: Fer2

UID:	001660844
Type:	Automatic domain
Parent:	e1wriA1
Range:	G:1-84
Ligands:	FAD FES
PDB:	2w55
PDB Description:	XANTHINE DEHYDROGENASE
UniProt:	O54050
Species:	Rhodobacter capsulatus

Domain
In chain context
In PDB context

Structure of domain e2w55G4

Domains in the same chain:

Download Pymol

e2w55G4	G:1-84	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2w55G3	G:85-166	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e2w55G1	G:179-345	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e2w55G2	G:346-462	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU

Domains in the same PDB:

e2w55A4	A:1-84	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2w55A3	A:85-166	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e2w55A1	A:179-345	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e2w55A2	A:346-462	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU
e2w55B3	B:2-124	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	CO dehydrogenase molybdoprotein N-domain-like
e2w55B4	B:125-377	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e2w55B2	B:378-777	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e2w55C4	C:1-84	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2w55C3	C:85-166	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e2w55C1	C:179-345	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e2w55C2	C:346-462	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU
e2w55D3	D:2-124	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	CO dehydrogenase molybdoprotein N-domain-like
e2w55D4	D:125-377	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e2w55D2	D:378-777	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e2w55E4	E:1-84	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2w55E3	E:85-166	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e2w55E1	E:179-345	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e2w55E2	E:346-462	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU
e2w55F3	F:2-124	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	CO dehydrogenase molybdoprotein N-domain-like
e2w55F4	F:125-377	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e2w55F2	F:378-777	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e2w55G4	G:1-84	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2w55G3	G:85-166	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e2w55G1	G:179-345	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e2w55G2	G:346-462	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU
e2w55H2	H:2-125	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	CO dehydrogenase molybdoprotein N-domain-like
e2w55H4	H:125-377	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e2w55H3	H:378-777	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain

Structural contacts of domain e2w55G4 of H-group "Ubiquitin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2w55H2	G:X,Y,Z->H:x,y,z	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Interaction Interface Pymol
e2w55H3	G:X,Y,Z->H:x,y,z	MocoBD/DmpA-related	Interaction Interface Pymol
e2w55H4	G:X,Y,Z->H:x,y,z	MocoBD/DmpA-related	Interaction Interface Pymol