ECOD: domain e2w9mA1

Domain ID e2w9mA1

A: a+b three layers
X: Nucleotidyltransferase-like
H: Nucleotidyltransferase
T: Nucleotidyltransferase
F: DNA_pol_B_thumb

UID:	001711573
Type:	Automatic and representative domain
Parent:	e3b0yA6
Range:	A:157-329
Ligands:	HG
PDB:	2w9m
PDB Description:	POLYMERASE X
UniProt:	Q9RX48
Species:	Deinococcus radiodurans

Domains in the same chain:

Download Pymol

e2w9mA4	A:8-93	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2w9mA2	A:94-156	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2w9mA1	A:157-329	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e2w9mA3	A:330-564	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

Structural contacts of domain e2w9mA1 of H-group "Nucleotidyltransferase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2w9mB2	A:X,Y,Z->B:x,y,z	TIM barrels	Interaction Interface Pymol
e2w9mB3	A:X,Y,Z->B:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2w9mB3	A:x,y,z->B:X-1,Y,Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2w9mB4	A:x,y,z->B:-X,Y-1/2,-Z	Nucleotidyltransferase	Interaction Interface Pymol
e2w9mB1	A:x,y,z->B:-X+1,Y-1/2,-Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2w9mB4	A:x,y,z->B:-X+1,Y-1/2,-Z	Nucleotidyltransferase	Interaction Interface Pymol
e2w9mB2	A:x,y,z->B:-X+1,Y-1/2,-Z	TIM barrels	Interaction Interface Pymol
e2w9mA2	A:X-1,Y,Z->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2w9mA3	A:x,y,z->A:X,Y,Z-1	TIM barrels	Interaction Interface Pymol