Domain ID e3b0yA6

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb
UID: 001240954
Type: Automatic domain
Parent: e2w9mA1
Range: A:154-339
Ligands: CA CL DGT
PDB: 3b0y
PDB Description: DNA POLYMERASE BETA FAMILY (X FAMILY)
UniProt: Q5SJ64
Hsap BLAST neighbor: P06746
Species:

Structure of domain e3b0yA6

Structural contacts of domain e3b0yA6 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3b0yA6 A:x,y,z->A:-X+1,Y-1/2,-Z Nucleotidyltransferase Interaction Interface Pymol
e3b0yA8 A:-X+1,Y-1/2,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3b0yA6 A:-X+1,Y-1/2,-Z->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e3b0yA5 A:-X+1,Y-1/2,-Z->A:x,y,z TIM barrels Interaction Interface Pymol
e3b0yA6 A:x,y,z->A:-X,Y-1/2,-Z Nucleotidyltransferase Interaction Interface Pymol
e3b0yA6 A:-X,Y-1/2,-Z->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e3b0yA5 A:-X,Y-1/2,-Z->A:x,y,z TIM barrels Interaction Interface Pymol
e3b0yA5 A:X,Y-1,Z->A:x,y,z TIM barrels Interaction Interface Pymol