Domain ID e2wh3K1

Download files:
  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 000363907
Type: Automatic domain
Parent: e2uubK1
Range: K:11-129
PDB: 2wh3
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e2wh3K1

Domains in the same chain:

Download Pymol

e2wh3K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e2wh3C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2wh3C1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2wh3E1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wh3E2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wh3F1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2wh3G1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2wh3H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2wh3H2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2wh3J1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2wh3K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2wh3L1 L:5-130 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2wh3N1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2wh3O1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2wh3P1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2wh3R1 R:19-88 HTH HTH tri-helical
e2wh3T1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2wh3Y3 Y:6-108 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e2wh3Y5 Y:111-213 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e2wh3Y6 Y:214-301 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e2wh3Y7 Y:302-356 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Structural contacts of domain e2wh3K1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wh3R1 K:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol
e2wh3G1 K:x,y,z->G:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol