Domain ID e2wjvD1

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  • A: extended segments
  • X: C-terminal region of nonsense mediated decay factor UPF2
  • H: C-terminal region of nonsense mediated decay factor UPF2
  • T: C-terminal region of nonsense mediated decay factor UPF2
  • F: Upf2
UID: 001097190
Type: Manual and representative domain
Range: D:1102-1128,D:1167-1198
PDB: 2wjv
PDB Description: REGULATOR OF NONSENSE TRANSCRIPTS 2
UniProt: Q9HAU5
Hsap BLAST neighbor: Q9HAU5
Species: Homo sapiens

Structure of domain e2wjvD1

Domains in the same chain:

Download Pymol

e2wjvD1 D:1102-1128,D:1167-1198 C-terminal region of nonsense mediated decay factor UPF2 C-terminal region of nonsense mediated decay factor UPF2 C-terminal region of nonsense mediated decay factor UPF2

Domains in the same PDB:

e2wjvA1 A:116-179 RING/U-box-like RING/U-box-like RING/U-box
e2wjvA2 A:180-280 RING/U-box-like RING/U-box-like RING/U-box
e2wjvA3 A:286-322,A:415-699 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2wjvA4 A:323-414 cradle loop barrel RIFT-related Alanine racemase-C
e2wjvA5 A:700-911 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2wjvB1 B:116-179 RING/U-box-like RING/U-box-like RING/U-box
e2wjvB5 B:180-277 RING/U-box-like RING/U-box-like RING/U-box
e2wjvB2 B:276-322,B:415-699 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2wjvB4 B:323-414 cradle loop barrel RIFT-related Alanine racemase-C
e2wjvB3 B:700-913 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2wjvD1 D:1102-1128,D:1167-1198 C-terminal region of nonsense mediated decay factor UPF2 C-terminal region of nonsense mediated decay factor UPF2 C-terminal region of nonsense mediated decay factor UPF2
e2wjvE1 E:1102-1129,E:1167-1198 C-terminal region of nonsense mediated decay factor UPF2 C-terminal region of nonsense mediated decay factor UPF2 C-terminal region of nonsense mediated decay factor UPF2

Structural contacts of domain e2wjvD1 of H-group "C-terminal region of nonsense mediated decay factor UPF2":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wjvA1 D:x,y,z->A:X,Y,Z RING/U-box-like Interaction Interface Pymol
e2wjvA2 D:x,y,z->A:X,Y,Z RING/U-box-like Interaction Interface Pymol
e2wjvB2 D:X-1,Y,Z-1->B:x,y,z P-loop domains-related Interaction Interface Pymol
e2wjvA2 D:-X+2,Y-1/2,-Z+1->A:x,y,z RING/U-box-like Interaction Interface Pymol