Domain ID e2wriE2

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 000375361
Type: Automatic domain
Parent: e1pkpA2
Range: E:74-155
PDB: 2wri
PDB Description:
Species:

Structure of domain e2wriE2

Domains in the same chain:

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e2wriE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wriE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e2wriC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2wriC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2wriE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wriE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wriF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2wriG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2wriH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2wriH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2wriJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2wriK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2wriL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2wriN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2wriO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2wriP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2wriR1 R:19-88 HTH HTH tri-helical
e2wriT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2wriY9 Y:4-38,Y:67-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2wriY7 Y:285-401 cradle loop barrel RIFT-related Alanine racemase-C
e2wriY8 Y:402-475 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2wriY10 Y:476-585 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wriY6 Y:586-690 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e2wriE2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wriH2 E:X,Y,Z->H:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol
e2wriH1 E:X,Y,Z->H:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol