Domain ID e2wrkE2

Download files:
  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 000375423
Type: Automatic domain
Parent: e1pkpA2
Range: E:74-155
PDB: 2wrk
PDB Description:
Species:

Structure of domain e2wrkE2

Domains in the same chain:

Download Pymol

e2wrkE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wrkE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e2wrkC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2wrkC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2wrkE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wrkE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wrkF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2wrkG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2wrkH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2wrkH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2wrkJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2wrkK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2wrkL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2wrkN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2wrkO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2wrkP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2wrkR1 R:19-88 HTH HTH tri-helical
e2wrkT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2wrkY9 Y:4-38,Y:67-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2wrkY7 Y:285-401 cradle loop barrel RIFT-related Alanine racemase-C
e2wrkY8 Y:402-475 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2wrkY10 Y:476-585 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wrkY6 Y:586-690 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e2wrkE2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wrkH1 E:X,Y,Z->H:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol
e2wrkH2 E:X,Y,Z->H:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol