Domain ID e2wrnR1

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Ribosomal_S18
UID: 000375499
Type: Automatic domain
Parent: e2uubR1
Range: R:19-88
PDB: 2wrn
PDB Description:
Hsap BLAST neighbor: Q9Y3D5
Species:

Structure of domain e2wrnR1

Domains in the same chain:

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e2wrnR1 R:19-88 HTH HTH tri-helical

Domains in the same PDB:

e2wrnC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2wrnC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2wrnE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2wrnE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2wrnF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2wrnG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2wrnH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2wrnH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2wrnJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2wrnK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2wrnL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2wrnN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2wrnO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2wrnP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2wrnR1 R:19-88 HTH HTH tri-helical
e2wrnT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2wrnZ3 Z:8-42,Z:67-212 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2wrnZ1 Z:213-312 cradle loop barrel RIFT-related Alanine racemase-C
e2wrnZ2 Z:313-405 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain

Structural contacts of domain e2wrnR1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wrnF1 R:x,y,z->F:X,Y,Z Ribosomal protein S6 Interaction Interface Pymol
e2wrnK1 R:x,y,z->K:X,Y,Z Ribonuclease H-like Interaction Interface Pymol