Domain ID e2x1wC1

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  • A: few secondary structure elements
  • X: Cystine-knot cytokines
  • H: Cystine-knot cytokines
  • T: Cystine-knot cytokines
  • F: PDGF
UID: 000386463
Type: Automatic domain
Parent: e1pdgA1
Range: C:119-215
Ligands: CS NAG
PDB: 2x1w
PDB Description: VASCULAR ENDOTHELIAL GROWTH FACTOR C
UniProt: P49767
Hsap BLAST neighbor: P49767
Species: Homo sapiens

Structure of domain e2x1wC1

Domains in the same chain:

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e2x1wC1 C:119-215 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines

Domains in the same PDB:

e2x1wA1 A:116-213 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2x1wB1 B:117-214 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2x1wC1 C:119-215 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2x1wD1 D:117-215 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2x1wL3 L:123-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2x1wL4 L:220-326 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2x1wM2 M:134-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2x1wM1 M:220-326 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2x1wN2 N:124-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2x1wN1 N:220-326 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2x1wO2 O:123-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2x1wO1 O:220-325 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2x1wC1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2x1wD1 C:X,Y,Z->D:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e2x1wL3 C:X,Y,Z->L:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2x1wL4 C:X,Y,Z->L:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2x1wO1 C:X,Y,Z->O:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2x1wO2 C:X,Y,Z->O:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2x1wN1 C:-X-1/2,-Y,Z-1/2->N:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2x1wL3 C:-X-1,Y-1/2,-Z+1/2->L:x,y,z Immunoglobulin-related Interaction Interface Pymol