Domain ID e2x9tE2

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 000391281
Type: Automatic domain
Parent: e1pkpA2
Range: E:74-155
PDB: 2x9t
PDB Description:
Species:

Structure of domain e2x9tE2

Domains in the same chain:

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e2x9tE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2x9tE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e2x9tC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2x9tC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2x9tE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2x9tE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2x9tF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2x9tG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2x9tH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2x9tH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2x9tJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2x9tK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2x9tL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2x9tN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2x9tO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2x9tP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2x9tR1 R:19-88 HTH HTH tri-helical
e2x9tT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2x9tY3 Y:6-108 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e2x9tY5 Y:111-213 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e2x9tY6 Y:214-301 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e2x9tY7 Y:302-356 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like

Structural contacts of domain e2x9tE2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2x9tH2 E:X,Y,Z->H:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol
e2x9tH1 E:X,Y,Z->H:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol