Domain ID e2xjzD5

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Unmapped domains
UID: 001834343
Type: Automatic domain
Parent: e1u5sB2
Range: D:48-77
Ligands: CL ZN
PDB: 2xjz
PDB Description: RHOMBOTIN-2
UniProt: P25791
Hsap BLAST neighbor: P25791
Species: Homo sapiens

Structure of domain e2xjzD5

Domains in the same chain:

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e2xjzD3 D:19-48 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzD5 D:48-77 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzD4 D:77-113 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzD1 D:113-147 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e2xjzA2 A:25-48 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzA3 A:49-82 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzA4 A:83-113 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzA1 A:113-149 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzB3 B:23-48 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzB4 B:48-77 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzB2 B:77-113 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzB1 B:113-148 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzC3 C:24-48 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzC5 C:48-77 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzC4 C:77-113 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzC2 C:113-148 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzD3 D:19-48 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzD5 D:48-77 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzD4 D:77-113 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzD1 D:113-147 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzE2 E:23-48 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzE3 E:49-82 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzE4 E:83-113 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xjzE1 E:113-149 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Structural contacts of domain e2xjzD5 of H-group "LIM domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2xjzE2 D:-X+1,Y,-Z-1->E:x,y,z LIM domain-like Interaction Interface Pymol
e2xjzE3 D:-X+1,Y,-Z-1->E:x,y,z LIM domain-like Interaction Interface Pymol
e2xjzC5 D:x,y,z->C:X,Y,Z LIM domain-like Interaction Interface Pymol
e2xjzC4 D:x,y,z->C:X,Y,Z LIM domain-like Interaction Interface Pymol
e2xjzE1 D:X,Y,Z->E:x,y,z LIM domain-like Interaction Interface Pymol