ECOD: domain e2xueB2

Domain ID e2xueB2

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: KDM6_GATAL

UID:	001414595
Type:	Automatic domain
Parent:	e2xueA3
Range:	B:1559-1622
Ligands:	SO4 ZN
PDB:	2xue
PDB Description:	LYSINE-SPECIFIC DEMETHYLASE 6B
UniProt:	O15054
Hsap BLAST neighbor:	O15054
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e2xueB1	B:1181-1292,B:1325-1487	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2xueB3	B:1488-1558,B:1623-1638	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e2xueB2	B:1559-1622	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Domains in the same PDB:

e2xueA1	A:1178-1487	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2xueA2	A:1488-1558,A:1623-1638	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e2xueA3	A:1559-1622	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e2xueB1	B:1181-1292,B:1325-1487	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2xueB3	B:1488-1558,B:1623-1638	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e2xueB2	B:1559-1622	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Structural contacts of domain e2xueB2 of H-group "LIM domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2xueA1	B:X,Y-1,Z->A:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol
e2xueA2	B:X,Y-1,Z->A:x,y,z	C-terminal helical domain in Jumonji domain-containing histone demethylases	Interaction Interface Pymol
e2xueA2	B:x,y,z->A:X-1,Y+1,Z	C-terminal helical domain in Jumonji domain-containing histone demethylases	Interaction Interface Pymol
e2xueA3	B:x,y,z->A:X-1,Y+1,Z	LIM domain-like	Interaction Interface Pymol
e2xueA1	B:x,y,z->A:X,Y,Z	Double-stranded beta-helix	Interaction Interface Pymol