Domain ID e2xzn51

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Ribosomal_S26e
UID: 000410858
Type: Automatic domain
Parent: e2xzm51
Range: 5:2-99
Ligands: MG ZN
PDB: 2xzn
PDB Description:
Hsap BLAST neighbor: P62854
Species:

Structure of domain e2xzn51

Domains in the same chain:

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e2xzn51 5:2-99 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e2xzn11 1:2-68 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2xzn21 2:2-208 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2xzn31 3:2-109 Alpha-lytic protease prodomain-like Ribosome-binding factor A (RbfA)-related Ribosome-binding factor A (RbfA)-related
e2xzn32 3:110-197 Alpha-lytic protease prodomain-like Ribosome-binding factor A (RbfA)-related Ribosome-binding factor A (RbfA)-related
e2xzn42 4:15-116 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e2xzn41 4:117-229 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e2xzn51 5:2-99 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xzn62 6:26-81 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2xzn71 7:2-105 HTH HTH winged
e2xzn81 8:23-115 HTH HTH winged
e2xzn91 9:72-169 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2xznC3 C:3-103 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2xznC4 C:95-231 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2xznF1 F:13-101 Glucose permease domain IIB-like eIF1-like eIF1-like
e2xznG1 G:9-200 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2xznH1 H:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2xznH2 H:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2xznJ1 J:14-118 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2xznK1 K:12-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2xznL1 L:2-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2xznN1 N:3-55 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2xznO2 O:4-84 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e2xznO1 O:85-153 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2xznP1 P:2-149 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2xznR1 R:6-343 beta-propeller-like beta-propeller 7-bladed
e2xznT1 T:6-155 HTH HTH winged
e2xznU1 U:3-126 Bacillus chorismate mutase-like L30e-like L30e-like
e2xznW2 W:2-118 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e2xznW1 W:119-177 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2xznW3 W:178-260 SH3 SH3 SH3
e2xznY1 Y:1-235 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like

Structural contacts of domain e2xzn51 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2xznK1 5:x,y,z->K:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e2xzn42 5:x,y,z->4:X,Y,Z 40S ribosomal protein S3A N-terminal domain Interaction Interface Pymol
e2xzn41 5:x,y,z->4:X,Y,Z 40S ribosomal protein S3A C-terminal domain Interaction Interface Pymol
e2xzn11 5:x,y,z->1:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol