Domain ID e2y0wZ1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: GTP_EFTU_D2
UID: 000414417
Type: Automatic domain
Parent: e2c78A1
Range: Z:213-312
PDB: 2y0w
PDB Description:
Hsap BLAST neighbor: P49411
Species:

Structure of domain e2y0wZ1

Domains in the same chain:

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e2y0wZ3 Z:1-41,Z:66-212 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2y0wZ1 Z:213-312 cradle loop barrel RIFT-related Alanine racemase-C
e2y0wZ2 Z:313-405 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e2y0wC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2y0wC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2y0wE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2y0wE3 E:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2y0wF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2y0wG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2y0wH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2y0wH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2y0wJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2y0wK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2y0wL1 L:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2y0wN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2y0wO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2y0wP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2y0wR1 R:19-88 HTH HTH tri-helical
e2y0wT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2y0wZ3 Z:1-41,Z:66-212 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2y0wZ1 Z:213-312 cradle loop barrel RIFT-related Alanine racemase-C
e2y0wZ2 Z:313-405 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain

Structural contacts of domain e2y0wZ1 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y0wL1 Z:x,y,z->L:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol