Domain ID e2y0yH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000414462
Type: Automatic domain
Parent: e1seiA2
Range: H:67-138
PDB: 2y0y
PDB Description:
Species:

Structure of domain e2y0yH2

Domains in the same chain:

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e2y0yH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2y0yH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e2y0yC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2y0yC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2y0yE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2y0yE3 E:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2y0yF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2y0yG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2y0yH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2y0yH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2y0yJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2y0yK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2y0yL1 L:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2y0yN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2y0yO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2y0yP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2y0yR1 R:19-88 HTH HTH tri-helical
e2y0yT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2y0yZ3 Z:1-41,Z:66-212 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2y0yZ1 Z:213-312 cradle loop barrel RIFT-related Alanine racemase-C
e2y0yZ2 Z:313-405 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain

Structural contacts of domain e2y0yH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y0yE3 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2y0yL1 H:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol