Domain ID e2y13X1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal proteins S24e, L23 and L15e
  • T: Ribosomal proteins S24e, L23 and L15e
  • F: Ribosomal_L23
UID: 000414623
Type: Automatic domain
Parent: e2j01X1
Range: X:3-94
PDB: 2y13
PDB Description:
Species:

Structure of domain e2y13X1

Domains in the same chain:

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e2y13X1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e

Domains in the same PDB:

e2y1301 0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2y1311 1:3-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e2y1321 2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2y1331 3:1-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e2y1341 4:4-47 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e2y1351 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2y1371 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e2y1381 8:2-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e2y1391 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e2y13C4 C:1-67,C:160-228 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e2y13C3 C:68-159 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e2y13D1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2y13D2 D:127-276 SH3 SH3 SH3
e2y13F1 F:1-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2y13G1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2y13H1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2y13H2 H:83-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2y13N1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2y13O1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2y13R1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2y13U1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e2y13V1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e2y13W1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2y13X1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2y13Y1 Y:2-101 SH3 SH3 SH3
e2y13Z1 Z:3-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2y13Z2 Z:93-186 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e2y13X1 of H-group "Ribosomal proteins S24e, L23 and L15e":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y1321 X:x,y,z->2:X,Y,Z Ribosomal protein L29 (L29p) Interaction Interface Pymol
e2y1371 X:x,y,z->7:X,Y,Z 50S ribosomal protein L34 Interaction Interface Pymol