Domain ID e2y16J1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal protein S10
  • T: Ribosomal protein S10
  • F: Ribosomal_S10
UID: 000414696
Type: Automatic domain
Parent: e2uubJ1
Range: J:3-100
PDB: 2y16
PDB Description:
Hsap BLAST neighbor: P60866
Species:

Structure of domain e2y16J1

Domains in the same chain:

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e2y16J1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10

Domains in the same PDB:

e2y16C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2y16C1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2y16E4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2y16E3 E:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2y16F1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2y16G1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2y16H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2y16H2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2y16J1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2y16K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2y16L1 L:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2y16N1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2y16O1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2y16P1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2y16R1 R:19-88 HTH HTH tri-helical
e2y16T1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e2y16Z3 Z:1-41,Z:66-212 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2y16Z1 Z:213-312 cradle loop barrel RIFT-related Alanine racemase-C
e2y16Z2 Z:313-405 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain

Structural contacts of domain e2y16J1 of H-group "Ribosomal protein S10":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y16N1 J:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e2y16C2 J:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e2y16F1 J:x,y,z->F:-X+1,Y-1/2,-Z+1 Ribosomal protein S6 Interaction Interface Pymol