Domain ID e2ykgA1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: DEAD
UID: 001813292
Type: Automatic domain
Parent: e5dcaA10
Range: A:236-239,A:242-453
Ligands: SO4
PDB: 2ykg
PDB Description: PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
UniProt: O95786
Hsap BLAST neighbor: O95786
Species: Homo sapiens

Structure of domain e2ykgA1

Structural contacts of domain e2ykgA1 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ykgA3 A:x,y,z->A:X-1/2,-Y+1/2,-Z P-loop domains-related Interaction Interface Pymol
e2ykgA3 A:x,y,z->A:X-1/2,-Y-1/2,-Z P-loop domains-related Interaction Interface Pymol
e2ykgA3 A:X,Y-1,Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e2ykgA3 A:x,y,z->A:X-1,Y,Z P-loop domains-related Interaction Interface Pymol
e2ykgA4 A:x,y,z->A:X-1,Y+1,Z Helical bundle in Hef helicase Interaction Interface Pymol