Domain ID e2ynaA1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_C30
UID: 001113264
Type: Automatic domain
Parent: e2ducA2
Range: A:1-189
Ligands: GOL IMD NI
PDB: 2yna
PDB Description: 3C-LIKE PROTEINASE
UniProt: P0C6T4
Species: Tylonycteris bat coronavirus HKU4

Structure of domain e2ynaA1

Structural contacts of domain e2ynaA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ynaB2 A:X,Y,Z->B:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2ynaB1 A:X,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol
e2ynaB2 A:-X+1,-X+Y,-Z+1/3->B:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2ynaA2 A:x,y,z->A:-X+1,-X+Y,-Z+1/3 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2ynaA1 A:x,y,z->A:Y,X,-Z RIFT-related Interaction Interface Pymol
e2ynaA1 A:Y,X,-Z->A:x,y,z RIFT-related Interaction Interface Pymol
e2ynaB1 A:X-1,Y,Z->B:x,y,z RIFT-related Interaction Interface Pymol