| UID: | 001523316 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1pdaA4 |
| Range: | A:3-102,A:199-219 |
| Ligands: | DPM |
| PDB: | 2ypn |
| PDB Description: | PROTEIN (HYDROXYMETHYLBILANE SYNTHASE) |
| UniProt: | P06983 |
| Hsap BLAST neighbor: | P08397 |
| Species: | Escherichia coli |
Structure of domain e2ypnA2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e2ypnA2 of H-group "Periplasmic binding protein-like II":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2ypnA2 | A:x,y,z->A:-X,-Y,Z | Periplasmic binding protein-like II | Interaction Interface Pymol |
| e2ypnA1 | A:x,y,z->A:-X,-Y,Z | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | Interaction Interface Pymol |
| e2ypnA2 | A:-X,-Y,Z->A:x,y,z | Periplasmic binding protein-like II | Interaction Interface Pymol |
| e2ypnA1 | A:-X,-Y,Z->A:x,y,z | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | Interaction Interface Pymol |
| e2ypnA1 | A:-X+1/2,Y-1/2,-Z+1->A:x,y,z | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | Interaction Interface Pymol |
| e2ypnA3 | A:-X+1/2,Y-1/2,-Z+1->A:x,y,z | Periplasmic binding protein-like II | Interaction Interface Pymol |
| e2ypnA1 | A:-X+1/2,Y-1/2,-Z->A:x,y,z | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | Interaction Interface Pymol |
