Domain ID e2yy5B1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000341077
Type: Automatic domain
Parent: e1i6lA1
Range: B:1-346
Ligands: SO4 WSA
PDB: 2yy5
PDB Description: Tryptophanyl-tRNA synthetase
UniProt: P75510
Hsap BLAST neighbor: Q9UGM6
Species:

Structure of domain e2yy5B1

Structural contacts of domain e2yy5B1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yy5A1 B:x,y,z->A:X,Y,Z HUP domains Interaction Interface Pymol
e2yy5B1 B:x,y,z->B:-X+1,Y,-Z+1 HUP domains Interaction Interface Pymol
e2yy5B1 B:-X+1,Y,-Z+1->B:x,y,z HUP domains Interaction Interface Pymol
e2yy5A1 B:x,y,z->A:-X+2,Y,-Z+1 HUP domains Interaction Interface Pymol
e2yy5B1 B:x,y,z->B:X,Y-1,Z HUP domains Interaction Interface Pymol
e2yy5B1 B:X,Y-1,Z->B:x,y,z HUP domains Interaction Interface Pymol
e2yy5A1 B:-X+2,Y-1,-Z+1->A:x,y,z HUP domains Interaction Interface Pymol
e2yy5A1 B:-X+1,Y-1,-Z+1->A:x,y,z HUP domains Interaction Interface Pymol
e2yy5A1 B:X,Y-1,Z->A:x,y,z HUP domains Interaction Interface Pymol
e2yy5B1 B:x,y,z->B:-X+2,Y,-Z+1 HUP domains Interaction Interface Pymol
e2yy5B1 B:-X+2,Y,-Z+1->B:x,y,z HUP domains Interaction Interface Pymol
e2yy5A1 B:x,y,z->A:-X+2,Y-1,-Z+1 HUP domains Interaction Interface Pymol
e2yy5B1 B:x,y,z->B:-X+2,Y-1,-Z+1 HUP domains Interaction Interface Pymol
e2yy5B1 B:-X+2,Y-1,-Z+1->B:x,y,z HUP domains Interaction Interface Pymol