Domain ID e2z4kH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000328354
Type: Automatic domain
Parent: e1seiA2
Range: H:66-129
PDB: 2z4k
PDB Description:
Species:

Structure of domain e2z4kH2

Domains in the same chain:

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e2z4kH1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2z4kH2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e2z4kC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e2z4kC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e2z4kE1 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e2z4kE2 E:78-147 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2z4kF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e2z4kG1 G:11-146 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e2z4kH1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e2z4kH2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e2z4kJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e2z4kK1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2z4kL1 L:1-118 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2z4kN1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e2z4kO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e2z4kP1 P:1-78 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e2z4kR1 R:19-73 HTH HTH tri-helical
e2z4kT1 T:4-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e2z4kH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2z4kE2 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2z4kL1 H:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol