ECOD: domain e2zxiB1

Domain ID e2zxiB1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: FAD/NAD(P)-binding domain
F: GIDA

UID:	001388427
Type:	Automatic domain
Parent:	e3g5qA1
Range:	B:-1-199,B:336-450
Ligands:	FAD
PDB:	2zxi
PDB Description:	TRNA URIDINE 5-CARBOXYMETHYLAMINOMETHYL MODIFICATION ENZYME MNMG
UniProt:	O66962
Hsap BLAST neighbor:	Q9Y2Z2
Species:	Aquifex aeolicus

Domains in the same chain:

Download Pymol

e2zxiB1	B:-1-199,B:336-450	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2zxiB3	B:200-335	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e2zxiB2	B:451-537	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA
e2zxiB4	B:538-615	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e2zxiA1	A:1-199,A:351-465	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2zxiA2	A:200-350	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e2zxiA3	A:466-552	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA
e2zxiA4	A:553-615	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2zxiB1	B:-1-199,B:336-450	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2zxiB3	B:200-335	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e2zxiB2	B:451-537	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA
e2zxiB4	B:538-615	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2zxiC2	C:-1-199,C:336-450	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2zxiC9	C:200-335	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e2zxiC10	C:451-537	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA
e2zxiC7	C:538-615	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2zxiD9	D:-1-199,D:336-450	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2zxiD10	D:200-335	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e2zxiD11	D:451-537	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA	C-terminal helical domain in tRNA modifying enzyme GidA
e2zxiD8	D:538-615	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Structural contacts of domain e2zxiB1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2zxiA1	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e2zxiA2	B:x,y,z->A:X,Y,Z	FAD-linked reductases-C	Interaction Interface Pymol
e2zxiB1	B:x,y,z->B:-X-1,Y-1/2,-Z	Rossmann-related	Interaction Interface Pymol
e2zxiB4	B:x,y,z->B:-X-1,Y-1/2,-Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2zxiB1	B:-X-1,Y-1/2,-Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e2zxiA3	B:-X,Y-1/2,-Z->A:x,y,z	C-terminal helical domain in tRNA modifying enzyme GidA	Interaction Interface Pymol