| UID: | 000136961 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1iz5A2 |
| Range: | B:124-248 |
| PDB: | 3a2f |
| PDB Description: | DNA polymerase sliding clamp |
| UniProt: | O73947 |
| Species: | Pyrococcus furiosus |
Structure of domain e3a2fB2
Domains in the same chain:
| e3a2fB1 | B:2-123 | DNA clamp | DNA clamp | DNA clamp |
| e3a2fB2 | B:124-248 | DNA clamp | DNA clamp | DNA clamp |
Domains in the same PDB:
Structural contacts of domain e3a2fB2 of H-group "DNA clamp":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3a2fA2 | B:x,y,z->A:X,Y,Z | "thumb" domain in bacteriophage RB69-like DNA polymerase I | Interaction Interface Pymol |
| e3a2fA5 | B:x,y,z->A:X-1/2,-Y+1/2,-Z | Ribonuclease H-like | Interaction Interface Pymol |
| e3a2fA6 | B:-X-1,Y-1/2,-Z+1/2->A:x,y,z | Adenylyl and guanylyl cyclase catalytic domain-like | Interaction Interface Pymol |
| e3a2fA6 | B:x,y,z->A:X-1,Y+1,Z | Adenylyl and guanylyl cyclase catalytic domain-like | Interaction Interface Pymol |
