ECOD: domain e3ag4N1

Domain ID e3ag4N1

A: alpha superhelices
X: Cytochrome c oxidase subunit I-like
H: Cytochrome c oxidase subunit I-like
T: Cytochrome c oxidase subunit I-like
F: COX1

UID:	000389556
Type:	Automatic domain
Parent:	e1v54A1
Range:	N:1-514
Ligands:	CDL CHD CU CYN DMU HEA MG NA PEK PGV PSC TGL
PDB:	3ag4
PDB Description:	CYTOCHROME C OXIDASE SUBUNIT 1
UniProt:	P00396
Hsap BLAST neighbor:	P00395
Species:	Bos taurus

Domain
In chain context
In PDB context

Structure of domain e3ag4N1

Domains in the same chain:

Download Pymol

e3ag4N1	N:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like

Domains in the same PDB:

Structural contacts of domain e3ag4N1 of H-group "Cytochrome c oxidase subunit I-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ag4O2	N:X,Y,Z->O:x,y,z	Cupredoxin-related	Interaction Interface Pymol
e3ag4O1	N:X,Y,Z->O:x,y,z	Cytochrome c oxidase subunit II-like, transmembrane region	Interaction Interface Pymol
e3ag4P1	N:X,Y,Z->P:x,y,z	Cytochrome c oxidase subunit III-like	Interaction Interface Pymol
e3ag4Y1	N:X,Y,Z->Y:x,y,z	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Interaction Interface Pymol
e3ag4Q1	N:X,Y,Z->Q:x,y,z	Mitochondrial cytochrome c oxidase subunit IV	Interaction Interface Pymol
e3ag4S1	N:X,Y,Z->S:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e3ag4Z1	N:X,Y,Z->Z:x,y,z	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Interaction Interface Pymol
e3ag4G1	N:X,Y,Z->G:x,y,z	Mitochondrial cytochrome c oxidase subunit VIa	Interaction Interface Pymol
e3ag4T1	N:X,Y,Z->T:x,y,z	Mitochondrial cytochrome c oxidase subunit VIa	Interaction Interface Pymol
e3ag4X1	N:X,Y,Z->X:x,y,z	Mitochondrial cytochrome c oxidase subunit VIIb	Interaction Interface Pymol
e3ag4W1	N:X,Y,Z->W:x,y,z	Mitochondrial cytochrome c oxidase subunit VIIa	Interaction Interface Pymol
e3ag4U1	N:X,Y,Z->U:x,y,z	Cytochrome c oxidase subunit h	Interaction Interface Pymol
e3ag4V1	N:X,Y,Z->V:x,y,z	Mitochondrial cytochrome c oxidase subunit VIc	Interaction Interface Pymol

e3ag4A1	A:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e3ag4B1	B:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e3ag4B2	B:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e3ag4C1	C:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e3ag4D1	D:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e3ag4E1	E:5-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e3ag4F1	F:1-98	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e3ag4G1	G:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e3ag4H1	H:7-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e3ag4I1	I:1-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e3ag4J1	J:1-58	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e3ag4K1	K:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e3ag4L1	L:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag4M1	M:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e3ag4N1	N:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e3ag4O1	O:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e3ag4O2	O:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e3ag4P1	P:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e3ag4Q1	Q:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e3ag4R1	R:5-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e3ag4S1	S:1-98	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e3ag4T1	T:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e3ag4U1	U:7-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e3ag4V1	V:1-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e3ag4W1	W:1-58	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e3ag4X1	X:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e3ag4Y1	Y:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag4Z1	Z:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)