Domain ID e3ag4U1

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  • A: few secondary structure elements
  • X: Cytochrome c oxidase subunit h
  • H: Cytochrome c oxidase subunit h
  • T: Cytochrome c oxidase subunit h
  • F: COX6B
UID: 000389572
Type: Automatic domain
Parent: e1v54H1
Range: U:7-85
Ligands: PGV
PDB: 3ag4
PDB Description: CYTOCHROME C OXIDASE SUBUNIT 6B1
UniProt: P00429
Hsap BLAST neighbor: P14854
Species: Bos taurus

Structure of domain e3ag4U1

Domains in the same chain:

e3ag4U1 U:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h

Domains in the same PDB:

e3ag4A1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3ag4B1 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3ag4B2 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3ag4C1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3ag4D1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3ag4E1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3ag4F1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3ag4G1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3ag4H1 H:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3ag4I1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3ag4J1 J:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3ag4K1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3ag4L1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag4M1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e3ag4N1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3ag4O1 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3ag4O2 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3ag4P1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3ag4Q1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3ag4R1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3ag4S1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3ag4T1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3ag4U1 U:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3ag4V1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3ag4W1 W:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3ag4X1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3ag4Y1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag4Z1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e3ag4U1 of H-group "Cytochrome c oxidase subunit h":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ag4O1 U:x,y,z->O:X,Y,Z Cytochrome c oxidase subunit II-like, transmembrane region Interaction Interface Pymol
e3ag4O2 U:x,y,z->O:X,Y,Z Cupredoxin-related Interaction Interface Pymol
e3ag4H1 U:x,y,z->H:X,Y,Z Cytochrome c oxidase subunit h Interaction Interface Pymol
e3ag4P1 U:x,y,z->P:X,Y,Z Cytochrome c oxidase subunit III-like Interaction Interface Pymol
e3ag4T1 U:x,y,z->T:X,Y,Z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol
e3ag4N1 U:x,y,z->N:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol